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Allele data for germplasm "PI221607" from the experiment "Hamblin et al. (2005) Equilibrium Processes Cannot Explain High Levels of Short- and Medium-Range Linkage Disequilibrium in the Domesticated Grass Sorghum bicolor. Genetics 171: 1247-1256.".

E.g., Germplasm L-WA58, Marker/locus pSB0080.

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Germplasm
Accession Name

Germplasm
Accession
Number

Subsp.
& subtaxa

Country of
Origin

Stock
Number

Locus
name
Genotype
View All Genotypes on
Marker
PI221607   bicolor, NULL Nigeria   LDregion1A CTTTTTGTGTTTTGAGAGAGTTCTACTATACTTCTGTTGGACTGATCATT
GTAAAGATTTGTTCAAATAGGGTCATCTTAATTGTTTGAAATCTGGGAAC
TGTGGCTTCACTGCACTCAGGAAAAGGCAATTCATGGTTATGGCATGAAT
AACTTATGGAAATAGACCTTAGAGTTGCTGCATGATTGTCACAAATCATT
GCTATGATATCTTATAATAGTTCTTTCTACTTTGCATTACATGTATAACT
GCAACTTTTAGTTGCGTTAAAAAAAACCCCTGTAACTCTTAGACCACTCA
CCACTGTAATCTTTCCTGAATTTTTGTTTAATGGCATGTATAAACTCACC
ACTTATGTACTTATCTAGGAAAAAATAGTCTAACTCTGTGCCCCATGTTT
GCAGCATTTTCAAACACAGTCCTCTAGAAAAAGTTATGCTGATGCAAACC
ATGTATCTGCTATCATTTTGGGTGGAGGCACTGGATCTCAGCTCTTTCCT
CTGACAAGCACAAGAGCTACGCCTGCTGTAAGAGATAACATTGAACATCA
AATGTTGATTACTCTATTATAGTATTATACAGAATATAAATTTCGAATTT
ATCTTAGTTTTGTACAGTATTTAGTGGATTCTTCTCATTTTCAAGATACA
CAATTGAACCATAATTGAAGTATGTAAGACAGCCAGTTAAAAAACTATAT
TCTTTTGGGAGACTTTCAGTCAAAATTTCTTAGAAGGTTTTTTGGTCCAG
ATGTTCTGATACCTTATTTTTT
View all "LDregion1A" genotypes
PI221607   bicolor, NULL Nigeria   LDregion1B CAAGCTTCTAGTATTGATATAATATTCAATCTGTTTAGCACGTGAACACC
TCAATTCTTGTTGTTACTGTACATCCCACCCAATCCCAGAGGCCCAGATT
ACCACGACATGAATACAAGAAGAATGTTGAACCCAGATCTAGAGTTTCTT
CTGTTTGGTGGTACTGTTGCAAATTGGTGGTGATTCATTTTGTTTTTGCA
CTTTCTGATAACAACAGGACTGTGTGATGATGGGAGCGGACATCTATGAA
ACTGAAGAAGAAGCTTCAAAGCTACTGTTAGCTGGGGAGGTCCCAGTTGG
AATAGGAGGAAACACAAAGATAAGGTGAGTATTGGATGTGGAACAACATT
GTATATGTATAACGACCGGTAGTTCCCAAATATCACACTCACTGACACCT
GATGGTATCCTCTGATGATTTCCAGGAACTGCATCATTGACATAAATGCT
AGGATTGGGAAGAACGTGGTGATCACAAACAGTAAGGTGAGCAAGCGCAC
CTACATGGGCGCAGAAACTTGTGTGCTCATCTATCCATTCCAATGCTGGT
GT-GTGACCATGCG-TTGTTCCACTCTTTGTGACAGGGCATCCAAGAGGC
TGATCACCCTGAGGAAGGGTACTACATAAAGTCTGGAATTGTGGTGATCT
TGAAGAATGCAACCATCAAGGATGGGTCTGTCATATAAACCGGGTGCCTG
TGCGCCTGCAAAACAAGAACCTACAATGGTATCACATCGATGGATCGTGT
AACCTTGGTAGGGAAGAGCCGCTTGCCAGAAAGTCCAGCGTTCGGGCGCA
A
View all "LDregion1B" genotypes
PI221607   bicolor, NULL Nigeria   LDregion1C CGCGTCCTCACTCCCGTGCGGCAACTGGGACACTGGGTCTGGGTGCGCCG
GCGCCCTACTCCATTCGCCTGCGGCCCAGGCGTTCGTCGCGTCCTTCGCC
GGCGACGAGCACCCAGCCACCCACCAGGTACCCTTTCACTCGTCCCTGCT
GTGCGAAACTGGGCACTCGAACCAGTAAGCTATTTGGCAATTTTTGTTCG
GATCTGATCTAATTACAATGTATCCATGCCTGCTAACTTCAATTTTTTTT
TTAATTTTCTTTACC--AAAAAAAAAGCGTACAAGGGTACACCCATGTCT
CTGCTCCTCTGCCCCTGGATTCCACGTCTAGCAG-------CATTGCTTT
TGGCTATCCATTTCGGGTCATAATTGGTGTCAGTATCACCCGTATGTTGA
AGGGTGTTAGTTAGGCTTGCAAAGGGATCGGTGTGGGGGTGCTCCTAATC
CTGATCCGCGAATCCGTTTACTCAATTTGAGGGTCTGGGGTCAATCCGTC
CGTTTATTTTTTTCTGGCAATGAAGATCCGTGCGCATCTAGGTTTGGCCC
TCTCTTCACTTGTTCGTTAAGGACTGTCTTCACCCTGAAGTTTGCAAACA
GAGCAACAGACCTGAAACTAGCAAGTTGAGATTTCTGCTCAATCGTGTTG
CTTTCAACTTCTCTGTGCATGCAAAGCACAATGCACACTCAATGACTAAA
TATAGAAGAGAAAATAAATAAAATTATAAAAAGTTAGTATTGAACAAAGA
TTAACAAATTACAG
View all "LDregion1C" genotypes
PI221607   bicolor, NULL Nigeria   LDregion1D TCTTCACTTTTAGCTACTTCCATACATGTCCCTAGCTTTGTAGCCTTCTC
CTTCCGTCCCACAATAAGTGCAATT--AGTTTTCAAACT--GTCTCAAAA
TAAGTGTTTCTAGCTTGTGCACCACCTAGCACTAGAGGGCTTAGTTGCCC
TCTGTTTCCAAAGAATAATCATTGCATGTTGGGACACTTTTTATAGGGGC
ATATATGTCATGTCCTAATAACACTGATCTACCCAAATAATCGTAGAACT
GCACTTACTGTCGGACAGAGTATAATTTCCTCCCTGAATCGTACAACTGC
ACTGTCCTATCCTGTCAAGTAGAAGTTGTTAATTTCCTCCATGAATCATC
AGATCTCATACCTTGTATGAGTATTGTTTAGTGCTACATCCTGTACTTTA
TCTCTCCCTCCCTCTCTCCCCCCAAAAAAGAAACAGGGGTGGGGAGATAC
CTTATGTTTCAGTTGTAGTAACTACCTGCGGTCATGTTTCAAAAAAAAAA
AA-----------GGAAAAGAAAAAACAAACCTACTTGCGGTCATGTACA
GGCAATGATATGGATGCTGACCTGTAACCTCATTAGTTTGAGTGCTATTT
GTATGATTGTATCCTTCGTTTCCTGTTTAATTTA---GTGAACTGTGCAT
CCTCGATCACTGTCCAATCTTACGGATACCTCACATTTTGTAAACATGCA
TTGGGTTATACTACCTTATCTAACTCT-AAGTGGCGCATGCTGTAATGTA
GGAGATAATCGAGGACGACGCAAAGCTTCGAGCACTCAAAGAAGAACATG
GAGAAGAAATCTATGCACTGGTGACAAAGGCGCTG
View all "LDregion1D" genotypes
PI221607   bicolor, NULL Nigeria   LDregion1E CTTACGCCTTGCCCCTATAGTAGAGACCCTACAAATAAGTTGTCTGTATT
CTTTTTGCAACAACTCAAAACACATCTCTTCGTAAATTCAACAGAATTTC
TTATATGAAAACTATCTATGTATAGGGAACATTATTTTTAATGAACGCTT
TCTCCATCCCA----------------AGGCGATGGCTTCTTCTTGCTTC
GGGTTTAGAAATGAGGGCTTGGGGAAATAGGTAGGCACAATGGTTGATGA
GGACATGACATCTATATAACTATTGATTATAAGGTGAGCTCATTTCTATA
TTTGTATAGTGATTTTT-GGTACAATTCACTTGGTTTTACATGTACATAT
CATTATTTGATTGTAGATTCAAATATATCTCAAAGTGCAAGTCCATCAAA
GTGGATCTTTCAATTCATCGGCAGCTCGATAGTGCTTTATTGGGAAAGCC
ATAACTTATCCATCCAAAGTGAGATCGAAGTCAATGAGCACTTGATGGAA
AGCTTGTTTGATAAGCTTTCAAATAGATCTGATCCTACCTCAATATCACA
CTGACAAGGACTTCAAATCATCATGATATTCTGTCACTGTTTCTGCCAAA
AGCTATATCATCATCATGAGCATATTTTCATCCTTAGGACCCTG--GCCT
AAGTGGGAGCACACCCCAAAGAGAAGGAGAACCCACCGAGAAATCCCTTG
GACGTCCTCCTCCTTGGCCACCACTTTAGAGGGTCAGCAATTTCGTTCAA
GCCAAGTCAGAGATCCCATCCATATCAAGTTCGAATCCATCTCGGG-CTC
CAGGAGCAGTCTATAGTAAAACAAATGCTCAGGATACATTCTAGACTCTA
TTTT-GATGATCCACATATGGATGGAAATATAATTTCATAATCTAATCAA
TGGCTTTAGTTTTAGGCCCAAACTCCATCGGAGTCAATGGGAATCGTCAA
AACAAGTTGACGTCCAGAATCTGTCAGGGCA
View all "LDregion1E" genotypes
PI221607   bicolor, NULL Nigeria   LDregion1F CCCTGGCGGAGAAGGCGGCGCTGGCGTACGCGGCGGAGCACGGCATGGAG
CTCGTCACCATCATCACGACGCTCGTGGTCGGGCCTTTCCTCAGCACGGG
CATGCCGCCGAGCATGATCACCGCGCTGGCGCTCGTCACGGGGAACGAGG
CGCACTACTCGATCCTGAAGCAGGTGCAGTTCGTCCACCTCGACGACCTC
TGCGACGCCCACATCTTCCTCTTCGAGCACCCGGCCGCCGCCGGGCGCTA
CGTCTGCTCCTCGTGCGACACCACCATACACGACCTCGCCGCCATGCTCA
GGGATAGGTACCCCGAGTACGACATCCCGGAGAGGTTCCCAGCTGGGACT
GGGATCGAGGACGACCTCCAAATGGTGCACATGTCGGCCAAGAAGCTCCA
AGACCTTGGGTTCACTTTCAGGTACACGAGGATGGAGGACATGTACGACG
ACGCCATCCGGACGTGCCGGGAGAAGGGCCTCATCCCCCTCGCCGCTGCC
GGAAGGGACGACGGCTCTGCCTCAGTGCGCGCACCCGGCGAGAGGGATGT
GACGGCCACTGCCGGAGGGGACGTCGTCTCTGCCCCAGTGCGCGCACCCG
GCGGCGAGACGGATGTGACGATTGGCGCTTAGGCAACAATCGCTGGTTCG
ACAAAAATTTACGGCT-CCCCGTGGATGATGATGCTATATATCAGCTATC
TATCGTACGTCCCTTCGAGCGCCGCTGGCAATGCGGGAGGGAATTTACAA
CAACAATGCCTCGACGCGCGAAGTAAATT-----CGGTGTGTTTGAATTC
C
View all "LDregion1F" genotypes
PI221607   bicolor, NULL Nigeria   LDregion2A CCATCCGCCATGGATAGGCCGGCTTCATGGGTCATGCCTGCGTGACCGCT
CTGTGTTGT---GTAACGTGTAGTATTGCTGGGCCAGAAACATCACGCCT
CGTTTGTCATGCCCCGGCAATAGTTGTAGTGGACTGTAGTCTGTAGTAAT
TCCGTTGCGACTTGATGACAGAATCCGAGCAAAATACGTTTGAAGGCCCC
CTGTCAGAAAGGAAAATCTGCACTTAAGGCGAGTTTT-ACTACTAGTGTG
CTCGTGCGTTGGTCTGTGCCCTT-GTACATACACGTTCCAACGCTGCACG
GAATTCATGTTTACTGTCATTAGTCTTTAAGATGGAAAATTTTTGTGGCT
TGTGGTATTGATGCTTGGTTGTTTTttttTTTTTGCTCCAGAATGTTTGG
AAATTGTTTCGGCGCACTGAATAGGTGATCACTTTGATTAGTTCTAGATA
TCTGAACAGTATTTTGATACGGTGTATGTTTCACCTTCCAAACATTTTTA
TCAGAAAAA----TAATAATAA---AAGATAGACCG--------------
--------------------------TATCATTTCCTTTGTCATATTTCT
TTAGTTCAATTTTGTTGTAGGATGTTGAGCTTATTTTACACTGAAAAAAT
TATACACTAATGGTTAAGGAGATTGTCATGACACTG--AATTGTCTGGCA
GATGCCATTTCACCTTTCAAACATTTTTTATTAGGGAAAAAAA-GATAGA
CAAGCGTATCATTTCCTTTGTCATATTTCTnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnn
View all "LDregion2A" genotypes
PI221607   bicolor, NULL Nigeria   LDregion2B GCGTGTGACATTGTTTTGCACGAAGGCTTTAAGGGCTTGT----TGCTAG
TTTTAGCGGGTTAGTGATTACTATCCTGATTCTAATTGGAAATGAAGTGT
CTTCCCTTTTCGTACATAATGTTATGATTTGTTATTCAGGCATCAATTGA
AATTTCTTTAGTTTCTTTTGTGCTGGGCATCTTTTATTATCGAGAAATTA
TTCTTACCTTTT-GAATTCTTATTGCTAGAATAGGCTTATATTTGTTGGT
GGAGATTATGCTGAAATGTGCATGATTCTGGATGATGAAGAAAATCAATC
GGATTCCCATTGATTTTACAATATGATTTTAACAACCAGCTACTTCTGAC
AAAATCATGCTATATCAGGATATACTTTGCCTCTTTGGTCCAGCAATCTA
ATCCTTTTGCTGATGTTTTTGTCATCGTGGTTGATTATTTGATACATGCA
TTTGTTATGATGATACACCATTTTCAGATCATTATGTATGGTTCTGTATC
ATCTTAACTCCTTTAAATTGATTCATTCATTTATTTATATTGTGATGTGC
CTATGATGTGATCAAAATATTTGCTACTCTTGATGGGTGTT---CCCATT
TGATGATCTTAACCACCAAGATCTCTGAGGCCCATCACATTGCAATTAGA
AAGACTCAGTTCATATGAGCACTTAAGAGTGGCAGTAGGAGTTGC-TGAT
GTAGTGTGTT
View all "LDregion2B" genotypes
PI221607   bicolor, NULL Nigeria   LDregion2C AGTGCATAAGAAAAGGTAAGTATAACTATAAAAATTTGCATTTTATCAGC
AAGTGACAATTATATCCAGCTTATGGCCCATCTACAAGACAAACTAGCTA
AATAGCAAATCATCTGATCAAGAATACAAGTCCTGCATTACATTCCTCAT
ACAATGAATGAAGGAAAAAATGCTACCCAAACACAGAGAAAAGACATCCC
ATGG---CTTCATCTTTAAGGAGGGGAGTATCAAACTGTAGCTGTTCAGG
AAACTCACTCAAAATAGTTCAGGGAGGAACAGGGGTGGAGCCAGAATATC
AAGTCACTAAGTCAAATACACTTTTTGGTTAACTAAGAAGGGTGGTTTGC
AAACCTTAAGGAACTTCTAATGGAATTTGAATTTTTCATCAGGTCAGCTG
AACCCAACGAATACACATAGCTCAGTTCCTGTGGAGGGACACACAAGGAA
CACTTGTCCATGGACACTTGTA------AAGTTTCATGATTTCTAAAACA
CAATCACGTGCAAGAGAATGATCTAACATTTTTATGATTAAGAATTAAAT
ATCACTACATCAGTACATTAATCATAATTGGAATTTGTTACTATTTGGTC
GAGAGAGTTGGACAGAGCAAAAGAGAAGGAAAAATAGTTTATAATACCTC
GGCCTCAATTTGCTGAAGTAAGCCAATCTCTGCTTGCTATTCCTAGTAAG
ACGGTGGTCTGA
View all "LDregion2C" genotypes
PI221607   bicolor, NULL Nigeria   LDregion2D CTGCTGCCTGCTGGCAGGGGAAAAAACTTGAGACGGTGGTGTGGTCGCTG
ATCGGCCGAGGACACAGGACAGCCAAGCCGAGGGCCAGGGGGAGGGGGGG
CACACGCTGTCGATCAGGGCCTTGTTTAGTTCCGAAAAATTTTGGGAAAA
CGACACTGTAGCACTTTCGTTTGTATTTGACAAATATTGTTCAATCGTGG
ACTAACTAGGCTCAAAAGATTTGTCTCGTTAATTCCGACCAAACTGTGCA
ATTAGTTTTTATTTTCGTTTATTTTTAATACTCCATGCATGCGTCTAAAG
ATTCGATGTGACGGAGAATGTGAAAAATTTTGCAAAATTTTCAGGGAACT
AAACAAGGCCCAGGTGTTGGCAAGCGTGTACCACGAGGTCGGGTCCCAAC
TCCCAACTACCCAGCTCACCCACCGGCCCGCCCGACCCACCTGTCAATGC
CCGCGCACGACTTGCACCCAACCCAGCCAGAGCCAGCCGCATCGCAGCTA
GCTTCGACTTCGAGGGCGAGCGAGCGGCTACCAACTGGTGACGCCGGCGC
GACGTCGTA-TCCACCACGTATGGCCGTAGCCCGCCAACTGCGTCTGCGT
GCACTGCTGACTGCTCCCTCCGTCCACAGTCGCG-TTTTTTACTTGCAGA
CATTATATTTAACTGTTTGTT-----------------------------
--------------------------------------------------
-------------------------------------AAAGTTCTAAAAC
GATACTATTTTTTGAACCGAGGAGGTAGCTTGGCCAAGCTGTGCAGGACA
ACGCCAGACCTCTTGCCCTGTGCTGACTACTAATTTGTACTGAGCACGGC
GAAGATCTGTACTAGATGCTGAATAATCCGCTGAAAGCTACTCTAAAGTC
CTTCCCCGTACCAGCAAGCAAACGGGACTTTTACTGGACGCCGCTGTCAC
A
View all "LDregion2D" genotypes
PI221607   bicolor, NULL Nigeria   LDregion2E TGTACAGCAGGACCATATCAAATCTAAAAATAGATTAATGATCCACTATA
TTAATAACAATACCAAGATGTGCACATGAAA-----------CTAACCGG
ACCAATGTGAAGTTCAATTTTACATCAACACCCAGCTACCACGGATTTTA
TTTTTCCTTAACCCAGCAGACCTTGCTACCTGCTCATCATTACCAGCTAT
CACATGACCACCAGGAACTTGCTCTTTCCTTTTTGAAACCCACCAAAGCT
TTGCCACTGGCTCAACATTGAGATTCCCTGACCAGTGACCAGCTCCTAGC
CTACCCATCCTAACCATAGGATTCAATCACGATGTGGTCTTCAGCTATTC
CATTATCAAGTTGAAACATCAGAACACTACTCAGGAAGACAGGTACAAAC
AACTCATGTTCATCAAAAGTTCACTTAATTTCCAGTCTTTTACCTACTTA
TTCTACTCAGCAATCGAACACTAGCAAAACATACAAACATTACTAATTAT
CATTCAAACCTGAAAATACAATCAAAAGTTTCATGATCTGGTATAGATTT
CTCACAGCTCA-TTTTTACCAACAAGTTCATCTCTCGTTAGCTCCACTTG
CCCCTGCTTTTCAAGAAGGAATTCCCCCTGCCTTTCACTAGTCAATAACT
TTTTT-AAACTACACGCACAGCATAGTAC-TTTTTTTCATGGAAAGCATT
CCCTTAATAAACATCAAATGACCAAATCAAC-AACCTAATCAAAGCACGG
AGAGTTTCATAACC
View all "LDregion2E" genotypes
PI221607   bicolor, NULL Nigeria   LDregion2F GTAGTATTACTAAAGCATGCAGCAGAACCACTTTCATCTAACTCGATCTT
CATACCAAACTCAACCAAATTGTCGCTGCATTTTAACACATTTGATTAGA
TCGCAACACAGAAATAATAAATTGGGCAGTGAACTTAAGAACAAATAAAT
ATTTGATTCGATACACAAAATGTGGACAATTTGCTAGTTTTAGTGTTAAT
AGCAGAGTAAGCTACTAGCCTACTATGACCCATCTGACTGAAAATAGTGA
ATGCCATTACCAAAGAAGTGTTTGGCAGTTACATTTTTGTTACAAACCAA
AAATACATCTAAAGAAATAGTTAAGCCCACA-TTATAAGTGTTGCAGACA
CCATCATGCTGTTACTGTGAAGAACAACT------ATTAGTAAAGTTGCA
GGCTCCTAATTTCAACATAAAAATGAAATGAAGAATCATCAATGATATGA
TGACACTGCAGCACCTCAATTTACCTTTGCTCAAACATTCCACATGTTTG
CGAAAAGGAATCAGTTGATACACCAAATGAATTTAGAAGTGAATCAATTT
CCATTTGCTCTTCACATTCATACAAGATGGGTGACTTTTTTGAGCCATTA
TCCACAATTCCATCTGGAGTATGTATGAATGAACTTGACAGTTGATGTGA
TATATCGTTCTGTCTGTCTCCAGTGCTTGGCATAAAGCCAGAAGATTCTA
TGTGACCAGGATTTGTTCCCC
View all "LDregion2F" genotypes
PI221607   bicolor, NULL Nigeria   LDregion3A nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCCG
CCGCGTCGACCCGTTTCCGGTTCACGTTGCAGGGCTCGGTCGCCCTGCCG
AAGNTGCTGCCGGGCCGCTTCAGGTGCGGCATCGCCTCCTTCTCGCTCAG
CAAGGTGCGCAGCTTCTTCTGCTCCTGCGCCATGGAAATCACCACTTTCA
GGTTAATTATTCAGAATTCTTGTGAGTGCTGTTCTTTTCTTGCATTTTCT
CGCAGGTGTCAAACGATACAGTTGCAGTAATGTCTGTTTACCCTGAGTCG
CCTCCTCTCCTCTTCCTGCCTGATCCTGGCTTGCTTGTGCTCCTCCAAGA
CTGCAACCAGGCGAGCCTTGAAAACGGCAAGAAACAGATCAAATTCGTCA
GTTTCTACGACCACGACCACTGAATCATGCCGCCACAGCAGGAACTGGAA
AAGTAGCATACCCCGTCGTACAGGAACGGCTTCTTTCTTTCGCTCTCCCA
TGCGAGTGTTCGAATGATCAGGTTGTCAACAACGGCTGCAGATTTACCAA
CAACGAATTGCTTTAACCGAACTTCAGAGATGCAATCGGAATAACCAAGT
AGGTATCACATTTGGTCTTGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
View all "LDregion3A" genotypes
PI221607   bicolor, NULL Nigeria   LDregion3BC TGGGCCGTTCCTGTGCGACGCCGTGAACTGATACCTCGGTGCGATGAGGG
CGAAAATCGGTGCCATGACCTGCAGTTGGAAGCAGAAACGTTTCTCTTG-
AGATGAGTGATGGTGTCTGCAGACTGCACACACTACCGTAAGCACAAAAT
TGGTAGC-AAGCGTGAAGTAATATTTTCTCAGAACAATCAACCCATAAAA
A-TGTGGAACAATAT--------------------CTGACCCCGTGACAC
AATGTTTAGGAAACCACAAGGGACCGTGCTTCTGCTTCATTTTTTC---A
ATGGTATAAATATACTGCTAGATTATATTGTTTAAGAAATAACAAGACAA
ATATTACTGAACATTCAACCTGCTTCATTTTTTCAAGGACATAAGTAGTA
GATATTGTTTAAGAAAGAACAAGACATACCGCTATGACTGGGTGGGCAGG
CTGAACACGGACAGCTGGTGATGTCAGGACAATACCGCTAATGAGAGTTT
TTACCTCTGGATCAAGCGCAGCCTGTTGTGAATCAAAACAGTTAGATTTA
AACAGCACAAAAGAAATGTGCAACAACAGTCCTGAA-GAAGTAAGTTCCA
CAATAATGCAATTCATATGGCACCGCTGCCATTACCTTCAGAATGATACC
TCCACCAGTCGAATGGCCGAAGCAGAAGCATGGAAGACCAGGGTTCTCGG
CTAATACTTTCTTGAGGTACATTTTCTACATTAATCAGAAGATTTTGAAT
AAGGACTTACACAGATGGGTCTCAGAGAGCTGTGAAGATATTCAATTGCT
CTTACCAAATCATTGACAGCATAATCAAGAGATnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnTAAATTTATCACTGATTCTCAGAGTGATGCCTGCAGTTCTGA
CAAATTCCAAATATTAGTTAGCTCAATTGTTTGCTGCATTATTACTATTG
CTATCTGGTTCCTTATTATAATCTAGAATCTCATCCTATGCTCCTACATC
TTGACATAGTTAATATTTTACATGGTTATACGTAGT-AAAAAAACTATAA
GCAACTCCAAACTAGCACGCAGTTTGTCTAATTCAACAAAGAGAAGCTAA
CCTGAATAAGGGAAAAATAGTTCATAGGCCATTTTTTTGTAATTGTTAAA
TGATGATGTGTACCCAACAATCTGTATCCCTCAAACAGAGTTAAGTGTCC
AAGCCGACAATTATGAATAATCAACACTTCAATTACAATATGGAATGGGA
ATCCACTGAACTGGTGCACTTTATCTAAGCTCCCAGATCACAACCAGATA
ATACACGATACAATAAGGCAACCACAAAGTAACCATGAAAGCGGAGAAGC
ATCATAGCTAAGCTCCCAGCTACAAACCAGATAACATTATCCATCTCAAC
TTCTCAAGGTCAGGGCCTACTTTGGCAGGCCACATGGCTTAGAATCCACC
AAATACAGTGGTAGGGAAAGCAGAAGTGCAACCTATAGGTCAGGAGTTCA
AATCCCTGTTCTCACCACAAAAATAAATAAATAAAAGGCCAATCGTTGCT
ATTTTCAGTGAATGGGTCGGTAACATTAGAATCGGATTTAGACGGAGTAA
GGACAACCAAGGAATGAACAGCTAAAATGAAGCCCTATTTT-GAATGGAG
CAATAAAATTAGAATGGGACTAAGACGGAGTCGGACAACCCAAGGAATGA
ACAGCCAAAATGAAGACAACAAAACACCTGGACACTAAAGTGTAAAAAAT
AGACAGCCTTGCATTTCACTTTAGAAATTGGGTCCATTTCGTCCTACTGA
GAAATTGGCATCTTTATTCATTGCTCTCGTCATAGCTGGTGAATTGTTTG
TGGCACTAGTTAATTAAGTTCACAATCACACAATCATCAACATGGATGAA
AATCAAATCAAAACATACATGCATAAGTAGTTCGTGATAC--TATAAGAT
TTGAAGCATGACAACCAAAAAAGGAGAAAAAAG
View all "LDregion3BC" genotypes
PI221607   bicolor, NULL Nigeria   LDregion3D nnnnAATCATCACCAAGTGTTGCAAAACCAGATACCAGATCAGAGGTATC
TTCTGCAATACCTTGACTGACAGACAACCAACTACTGCCAATTGTACGTC
TTCCACCTGAATATGTGAGTGCAAGGTTATTATTCAGGAGCCAAACAATA
TGATACAGAAAAATTAAAATAATCAGCATTAAGAAGTAAGAACATGCAGC
CATCACCTCACACTTCAGGGGAAAAAAGAAGAAAAACGTAGAAGATGAAT
GGAAAACAAAACAACTATAGAAAGATGAAACGTCGGTCAATGATCTATCT
AGGGGAAAAGAAAGAAACCATTAAGCAAAATAGTTTCTTTTTGTGTGTGT
GGAGAGGGAAGGGGGGCGAGGGGGGCATTGCTTTAAAAAAAATAATTACA
ACATATGGATTATCACTAATAATTTATACACGGTAGAGCAAGTATCGCAT
GCAATATATGTACTTGAAACGTCTGGAAAAACAAAAAACTAATAATTTTC
TCACATTGTAGTGGCAATAGACGAGGCTTAAAAAAATAAATGGGTCTGAC
AAAAATTTGCAAGTACATGTATCATTTCAAATTGAAGATCGTTAATAGTC
ATGTAAGTGTAAAAGATATGTTGCTACTTAGGATGTGCCTAGCCATGTCA
ATGAAGAGAATAAATAAATGTTGGTAATTCAGTAATTTACTAGTAACACC
AATAGGCAACATTTCACAAGAAAAGATGAGATTCTTATTCTGTATTATTA
TAACAAATGTACAGCAATAAACTACATATCAATCAATGTCCTTAGCCATT
CACAAATATGATACACAAAACATGAATATTAGTCGAACGTTCAAATTTCT
TTGGCCTACTGAACTAAAGTCAGCATTATGGCGTGGGAATATTTTGCATT
GATTGCAGTCTATTAAATAAAAGTGCCATATCACTATTGAACTCGCTAGC
AACATACCTGAAGATGTTATTTCTTGCCCAATGGGAACATCAAGATAAGA
GCCAATCATAAAGGCATGATCAACACTAGACTGCTTGGCTCCAGATCCAT
GGTGATTGATCTTTTCCTCCCAGTTCATGTTGACTAGCTTATCTTCAGAC
TTGAGCCTCACAGGAGGTAACTTCGGAAGCTCCTCACGCTGATTATCTCC
AACAAGCTGTAAATCGAAGCATCGGTCAGACACCTGATCTGTATCTAGGG
ATTTTTCGAAGTAATATTGCCTGTTCCCCTCATCAAGCTGTCCTTTTGCA
CCTTTTCCAACACCATCTCCATTAGTGCTCCTCTTTACTTCTTTCCTCTC
ATTTTCATGGTGCGTGCTATTGTAACTAGATGATGGGTTTTCCGCAGGGA
ATGGAAGCACTGTCTTAACTGTGCAACCATTCAACATCTCCTCTTTTTCT
GGTACTAGATTTTTATCCCTGGAATGACCTTGTTCATTGATTTCAGTCCT
CCCAGCAGCATCGACTTTTCCCTTCCCTCTTCCAAAAGAGACTTTTTGCT
CCAACACTGGGACAGGCTGTTCTGTCCCAACACCTCGATCCCTCTTCTCT
GCCAGCATCGCACCACGCCTATGCCTTGGCACCTCTTCTGACACCAGCAG
CTCAGCTAGCTGTTCAGCAGTGCTGTTTGCAATGCTGAAGGTCCAAGGAT
ACAGATCCCCCACGTTGTTCTCCTGAGGCTGGCCAATCCCAGAGCCCTTC
TTTCCATCCGAACC
View all "LDregion3D" genotypes
PI221607   bicolor, NULL Nigeria   LDregion3E GACCTTCATGACCATGTTGTTGGGGTGTGCTTTGTAGCCCAGGATATGAC
TGTTCATAAGTTGGTCATGGACAAATTTACTCGGGTTGAGGGGGACTACA
AGGCAATCATTCACAACCCAAACCCGCTCATTCCTCCTATATTTGGTGCT
GACCAATTTGGATGGTGCTCTGAGTGGAATGTAGCCATGACCAAGCTTAC
TGGGTGGCACAGAGATGAAGTGATAGATAAGATGCTCCTTGGTGAGGTTT
TTGACAGTAGCAATGCTTCCTGCCTTTTGAAGAGCAAAGATGATTTTGTA
CGTCTTTGCATTATCATCAACAGTGCATTAGCCGGTGAAGAGGCAGAAAA
TGCTCCATTCGGTTTGTTTGACCGCAATGGGAAATATATTGAATGCCTTC
TGTCAGTGAACAGAAAAGTAAATGCAGATGGTGTTGTCACTGGAGTGTTC
TGTTTCATTCATGTTCCTAGTGATGACCTGCAGCATGCGCTACATGTGCA
GCAAGCCTCTGAGCAGACAGCACAAAGAAGGTTGAAGGCTTTCTCGTACA
TGCGACATGCCATCAACAAACCTnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnAATGAAGAGCAGATGAGGCAGGTCCATGT
TGCAGATAGTTGTCATCGCCAGCTAAACAAGATACTTGCCGACTTAGATC
AAGATAACATTACTGACAAGTAATCTTCTAGTCTTTTAAACTGTTCTATT
AGGTTATTGTGTTTACTTTCATCTACCTCGTTATTTGACAACTTTCTGAA
CTGTAGGTTAATGGTATCACTTAATTTTATTTCACTAACTACTACTGAAG
CTTATAGCCATATTCGTTACTACCAACTTAATATTTATGTACCATTATGT
TCACAGGTCAAGTTGCTTGGATTTGGATATGGCTGAATTTGTGTTGGAAG
ATGTGGTGGTGTCTGCTGTAAGTCAAGTACTGATAGGTTGCCAGGGTAAA
GGTATCAGAGTTGCTTGCAACCTGCCAGAGAGATTCATGAAGCAAAAAGT
TTACGGGGATGGTATCCGACTCCAACAGATCCTCTCCGACTTCTTATTTG
TTTCGGTGAAGTTCTCTCCTGTTGGTGGCTCTGTTGATATCTCTTCCAAA
CTGACTAAGAACAGCATTGGGGAAAACCTTCATCTCATAGACTTCGAACT
TAGGTACACTTGCCATGCTAATTTGCATGCATACACTCATTTCTGAATAG
GAAATCATAAGGTATGAAGGCTTAAATTACTCTTGTGTTTATGGATTTAT
GGTTTTCAGGATCAAGCACCAAGGAGCAGGAGTCCCAGCAGAAATATTGT
CACAAATGTATGAGGAGGACAATAAAGAGCAGTCAGAGGAGGGTTTGAGC
CTTCTTGTTTCTAGAAACCTTCTGAGGCTCATGAATGGTAAC, GACCTT
CATGACCATGTTGTTGGGGTGTGCTTTGTAGCCCAGGATATGACTGTTCA
TAAGTTGGTCATGGACAAATTTACTCGGGTTGAGGGGGACTACAAGGCAA
TCATTCACAACCCAAACCCGCTCATTCCTCCTATATTTGGTGCTGACCAA
TTTGGATGGTGCTCTGAGTGGAATGTAGCCATGACCAAGCTTACTGGGTG
GCACAGAGATGAAGTGATAGATAAGATGCTCCTTGGTGAGGTTTTTGACA
GTAGCAATGCTTCCTGCCTTTTGAAGAGCAAAGATGATTTTGTACGTCTT
TGCATTATCATCAACAGTGCATTAGCCGGTGAAGAGGCAGAAAATGCTCC
ATTCGGTTTGTTTGACCGCAATGGGAAATATATTGAATGCCTTCTGTCAG
TGAACAGAAAAGTAAATGCAGATGGTGTTGTCACTGGAGTGTTCTGTTTC
ATTCATGTTCCTAGTGATGACCTGCAGCATGCGCTACATGTGCAGCAAGC
CTCTGAGCAGACAGCACAAAGAAGGTTGAAGGCTTTCTCGTACATGCGAC
ATGCCATCAACAAACCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnAATGAAGAGCAGATGAGGCAGGTCCATGTTGCAGA
TAGTTGTCATCGCCAGCTAAACAAGATACTTGCCGACTTAGATCAAGATA
ACATTACTGACAAGTAATCTTCTAGTCTTTTAAACTGTTCTATTAGGTTA
TTGTGTTTACTTTCATCTACCTCGTTATTTGACAACTTTCTGAACTGTAG
GTTAATGGTATCACTTAATTTTATTTCACTAACTACTACTGAAGCTTATA
GCCATATTCGTTACTACCAACTTAATATTTATGTACCATTATGTTCACAG
GTCAAGTTGCTTGGATTTGGATATGGCTGAATTTGTGTTGGAAGATGTGG
TGGTGTCTGCTGTAAGTCAAGTACTGATAGGTTGCCAGGGTAAAGGTATC
AGAGTTGCTTGCAACCTGCCAGAGAGATTCATGAAGCAAAAAGTTTACGG
GGATGGTATCCGACTCCAACAGATCCTCTCCGACTTCTTATTTGTTTCGG
TGAAGTTCTCTCCTGTTGGTGGCTCTGTTGATATCTCTTCCAAACTGACT
AAGAACAGCATTGGGGAAAACCTTCATCTCATAGACTTCGAACTTAGGTA
CACTTGCCATGCTAATTTGCATGCATACACTCATTTCTGAATAGGAAATC
ATAAGGTATGAAGGCTTAAATTACTCTTGTGTTTATGGATTTATGGTTTT
CAGGATCAAGCACCAAGGAGCAGGAGTCCCAGCAGAAATATTGTCACAAA
TGTATGAGGAGGACAATAAAGAGCCGTCAGAGGAGGGTTTGAGCCTTCTT
GTTTCTAGAAACCTTCTGAGGCTCATGAATGGTAAC
View all "LDregion3E" genotypes
PI221607   bicolor, NULL Nigeria   LDregion4A CGGCGGGCCGGAGAAGCAAGGAGGAGGAGGAGG---CATGGGGATGGGCA
GCGACGCTGCCGCCGTGTTGTTCCCCTTCTCT---------ACCACCACC
ACCACCACGTCGCCGCGGCTCTGCGGCACCGCCGTCAGTAGTCACAGGAG
GTCAGCAAGGATCCCCATTCCATCTCCAACTCCCGTCCGCTCTCCTTTGC
ATTGCA-----TTGCATAATGGCAACACGGAACAGGAACAGCTTGCGATT
TCTTACCTCTTTAGATTTGATCCCTCCCTTCACCGTTTGCTTCCCCGGCT
CGACTTCTCAACTCCGTCCATCTATCGTTTTGCAAGGACAAGCATCCCAC
GGCCACTCTGAAAAAGGGGG--GAAAAAATTGCTTTTGCTCCTCTGAAGG
TCCCGTCCAGCAGATGCCACTTCTGCTTCTCTTCATAATACCATCAGTCG
CCACCACCCCTGGATCTCTACAACATCCTTTCTTAGTTCATACAGTGCTT
TGTTATCATTTCCTAGAGAGTGAAATTTCATTACCTGTTCCGTGGTACAA
GCAGGTACTAGCAGCCATTCCCTGGAACAGTCTGTTTCAGACTTTCAGTC
AGTTGATTCTTCAGCATCCGCTGTTCTTGGGAGGGAGAGTGTGGCAAAGG
CAAAATGGTGTCATTACAAGCAATGCACTAGACGTTTACTACACATTGCC
AACTCAAGTGCTAACTAATCTTGGCGTCTAATAAAACTTTTGGGGG-ACA
TTGCATTGACCTGC
View all "LDregion4A" genotypes
PI221607   bicolor, NULL Nigeria   LDregion4C CAAATGGGTATGACACATGGACACAGTTTTCAGTTTCTTGTAAAGTTGAG
GTGTGAATAATATATTAGTTTTTTCTATTAAAAAATATTATCTTGTTATC
AAAAACATTGAAATTCCTAAGTCTGAAAAGGAACTGCACTTATGTATCCT
TGTGAACTGTTAAGATATATTGTGCTGTACTCCATCTAGTTCAGTGTGAA
GATCAATTATAAAAGCATGGCTTCATATTACAACCAACATTTTTATGGCC
CTGTCCTAAGATTCTTGATTTAAGTATTAATTTTAGGTCTTGAGCTTCGT
TCAGAACTGCCTTGAAATATTCCATATAAACTTGTTACTGAAACAAATTG
AATCTATGTGGCTGCAAACAACAGAAATGGCAAGATAAATTGCTAAACTC
CGGAACACATTCAGGATGTACACATAGTGCAAGAGAAATTGCTTTGAGTA
CCTCATCTACCTTGCAAATTCAATTTCATCTCACTGGCTCCATTGGAGCT
TGTTAATCTCATCACCTTTACTCATAATTCTCTGTGTCAGATTTTCTGTA
CATCTGGCCTAATAAGGTTCAATACCTTTCTCCACATTAGTAATAACAT-
------------TAGCAAGCCAATATA---TGTTAAATCACATCTTTCAT
CCTGATTTTTGTACTTTTCTGAATTTGCTGTTTTCTTATATCATATTTAA
GTA
View all "LDregion4C" genotypes
PI221607   bicolor, NULL Nigeria   LDregion4E TAAAGAAAGTACATTAGTTCAAAAGCAACCAAAGGAGGGTGAACTTCAGA
ACTTGGCATATAATGATCAAGAATTGCTGCATTGGCTAAACAAGTTTTCA
AGAGAGTAAAGGTAGAGGAGAAT-AGTCA---TCCATGACGTACTAAATG
CTTCACTAGTCAAAATACAGTGTGTTGTACTGGAACTTTTTTCGAATCAC
AAGGAAGGAACCTCAATTAAGGGACCTGGGGACCAATCTGGGTCCTCAAA
AATATCAATAAACACTGCAGGATAGTTTTTTTTTATCTTAACACTGCAGG
ATAGTTACTTCC-AAACTTAACTCTCTTGTCATTAATTTGAGAAATGGTA
AACACAGGTTATCGCATCATCTGCCAGCTTACTGCAAATTATAATCAGTA
TATGTTGATTTGCAACCATTACCTACTGAATCTGAGAAACAATTTGATGT
GCCTTTGTGTGCAGAACCAGAACTTATACAGACAAAACATACAAATTTAA
TTTCAGAGCTAAGTGCTTTGATTTGACAGTTGTTCTCAGTCAGTGAACCT
ATGATGATCCAATTAGATCCGCACCTTTTATCACACCCGAAAACACCATT
TGTAACACGCAGGCTAGTTTGCTCTGGTCACAAAGTGATCAATTGCACAG
ATCGATTGGAACATGAGCAGTAGACATTTATGTGGCTTTTTTTCTCCTTC
TGATCAGAATTGTACCGTTCTCATCAGAATTAAGTTTAAGGATGTGAATT
GCAACGCACAGGATACTTATTTCCGATCACGAAACGCTGA
View all "LDregion4E" genotypes
PI221607   bicolor, NULL Nigeria   LDregion5A CGCATGGGAGGTCTCCAGGGCAGGGATGATGCCCTCCAGACGAGAGACAC
GCTTGAAAGCTGAATGTGAGAGTAGCCATGTGATTAGATGTTCAACATAG
CATTGATGACATAAACAGAGTGAATACCCTACTGAATAAGCTGTGGAGAC
AGTTTCTCAATTATTCAGGAAAAAAAATCCTACAGGCCTTACGGATGCTG
AACAGTCAACAATGTATCTAGTGTCACATCTGAGTATAAGAGTGTTCAAG
ACTTGAACATTGTGTTTGGTTATTAAAAAAAAGCACATGTCAGCATCAGC
TAAGGAATAAGACTTGTCTTAAATATTTGTCTTATCTACTGAGGAAAACC
TTGGAGGCTAGGATTATGTTATTGGCATTGCAAATATCCAGAACAGCTAC
ATCGACTGAATATATAACATTTCGTCAATTAAAGATAGCATCCTGCTGAT
TCAACACGTTTGACATATTTTTCACATGTTTAAAACAATTTCAGGCACAA
ATGACCAAACAGTGCAGTTGTGCAGTTCTACTGATATAGCATACAGTGGG
ATTTGGACACACATTCATAATTCATTGCTGCCCCTATCACATCAAGAAAT
ATCAGAATGCCCATGTGTTATTTAGAAAAGTTAGTAATTTGATAGTGATC
TCATCATGTTTGAAAGCTGACACCAATGCAAGCATCATTTTGTAGGTGCA
TTGGAAATCAACTTGTCAAAAATTAGTTCAACCAATACAGAAGA
View all "LDregion5A" genotypes
PI221607   bicolor, NULL Nigeria   LDregion5B AGATGCATTCAGGTATGCATGCAGTGTGTTGGCAGTTTGAATAGTGGCTC
AGATCCTTTAATCATCTCATACTTTCAAAAGATCATATTTTCTGTTTACA
CTTTATGCTGAGGACTATGTATGTCAACAACATAATAAAAATGCCTTAAA
GATAGTACTGGTTACAGCACATAAAAA-AATACAGAACTGATAGGATTTC
TTTTAGCATTGAGACAACTGCAAGAACTTAAGGGAATCAAATTCTAAATA
AAAGAACCATATGTGCTGAAAGTGTTCAGTTAAACGGTTCTCCATCCG--
--AAATTATAGGCCGTTTTGGTTTTTCCAGATAC---------ATAAGAA
AAATGTATATCTAAAAAAAGCCAAAACAGACTATAATTTGGAACAGAGGG
AGCATATGCTAAACATTCAGTCACTCGTTCTTAGCCAAAAAGTAGGCTAC
AGGTCCTAAACGTCCATTTAGTCAGCCCAAAAAGACCTTTTAGCGTTTAT
ATGATGTTTAATCAGCCTAAACACAATTGAACATAAATAAACATCTTCAA
GGTGTACTTTTCGGAAATTTCCAAACTGTAGATTATGATTTAAGACTAGA
TGCCTTATGAGTTANNNNNNNNNNNNNNNNNNNNNNNNNTCAGTGAGAGA
CTGAGAATCCAAAAAATATTTGGACCAAA
View all "LDregion5B" genotypes
PI221607   bicolor, NULL Nigeria   LDregion5C TAAGAGGAATGATTCAAATTCCGCAATTATAACGCGCCCATCAGTTTCAT
GCTTAGAAGCTGAAAAGTGCAAGGAAGTGGAATCTAAGAAAGAACTGTAC
TACATGTGAAATTTAGTTATGAAAAACAAACAACCATTCAATATGCCTAT
TTGTTAAGGAGCTTGCTGGTCTGGAACTTTTCATTCCTTAATTTTAGTTT
TTATACAAAAAAACGTGCATAGATATATCAAGAGAAGATGATCAGGTACA
CAGATGCATGCCTTAAGTTTTGTTTTCCAACAGATTCTTGCAATGATTAT
CCTAATTCTAACACAATCTATGAAAGTGACCATATTCTTTTAGGACTTTG
TAACTGGCATAATACACCCACATG---CTCTAGTCATGACATGAAAACAT
GAGTACTGGCTGTCACGATCTGTAAGATGCTTTGCTCTGTTCTGATTTTC
AACTCAAAAATTTCTAAATTAAAAAATTCAATAGTTTGGACAACTTTGTC
ATAGAATATGACTACCAAATTAGAAGCAGTTACTAAACCAGGTCTTGAAA
TACAATCATAAAACCATAATTTGAAAAGCAGAATGGCTGCAGCCTTAGAG
TAGAAAATAGAAAATTGTGTATAGAGCTAGGATAGCAGGGAATCATCTCC
AAACATACATGTTCTATCCAAGTTGAAAGACACC
View all "LDregion5C" genotypes
PI221607   bicolor, NULL Nigeria   LDregion5D CTCTTCTCGGCCTCCCCCACCTGCTCGACCGAATGCCCAGCTGGGGATTC
CAAAATGTCTCTGCGTGTGTGGTTACGGCGAAGGTTTCGGATCGTCTCGT
AGTTTTCCTTTGTCTTAAGTCTGATGCTGCTGCGAACATGTGAAGGACTA
ACTGTTTAATTTGCTTGGTTGCCTGCATTCTGTGAAGTAAAGTCCACAAA
TGACAATACTGAATGTCTGCCACTGAAACTGTGTTGCCACTTACAAAGCC
TTCATCTCTTGCTTATCCATTGCATAAGATTTTTAGTCCAGTAGTTGTAC
AGACGGTAGAGTGCTGCGTATGGCAGTCATGTTTACCAGAAAAGATGAAT
CTGTTGTTTGTGTTAACCATAGTTGAAACGTGTTGTAAAATATGGAGTAG
ACTATTCCGTTGCCTAACAAACTTTAGTTCAAAATGTGCTCGCTGTGA-T
TGCTTTCAACTTTTTTTTT-CCTTGGAGATAAATAATTATGGCCTTCTAT
GCAGTTTGATGCACTTGTTGCGGCATTGCCACTATCATCAGAAGAGGATC
AAGTGAAAAGAATCCAAGAGCTACAGGTAGATATCTGACAGTCAGATTAA
TTTATCGAGCACTGATTTTTCAAGGATGGGCATCTGTCAAGCTCCTCCAT
TAAATTGTATATGAACTTAAAATTTG
View all "LDregion5D" genotypes
PI221607   bicolor, NULL Nigeria   LDregion5E CGAGACGCCGCGCGACGACGAAAAC---CGGCCGGACGACGTGCGAACAG
ACGGCACGGCAGGAATCGTCGGAGTTGGATTGGATGATGATGATAAAGTA
TGTAGCTGGAGACCGTATATAGCTAGGGACGGATTGATTCTTTTCGAAAA
TGTTGTTAAAGATAAAGAGGATTATTGGGACGAAGGTGCAATGAAACTTC
TTTGAGCCTTTCTTCGCCGCAGCTTGCTCGACGACAGGACCTAGTACTTG
TGTGTGGGGGAAGAAGAGGAAAAGCTCTTTATTCCATGCTCATCTTTGCT
GTCTCTGAGAAGATAAAAGAGAACCCACGACGCTCACGCAACCACGTACG
CACTGCAGCCCTGCAGGTTCGCTACGGCTACGGCCTCCCGTGGTTTTTTG
CCGGGATCGATGATCCAACACAACACCACGCTCGCTCTGGATCGATGTCA
GGCGCCCCGTGCTCCACATTAACCTCCAGTTCTCGTAGAACAGTGGTTC-
TTTTCTTATATGGCGTATAGTCAGGCGTCCATTAATCATTAATAGTTACT
TCCTCCATTCCAAATTACAAGAAATTTGACTTTTTTTTTACCCTCAAGTT
TAATCAAACGTCTTATAATTTAGGATGAATTGAGTAGCTAACTAATAAAT
C--ATAGCTAATATTATTAGCTATTATATAGTTTGGTCCAACTAAACCTA
TTTGCATCGAAGAAGCTAATTATATTA--TTATTAGCATCTAACTAGTAT
TACCTTTATATAGATCCAAACACAAAAAACTTCATTTTCAAG
View all "LDregion5E" genotypes
PI221607   bicolor, NULL Nigeria   LDregion6B CATCATCACAGGCAAGCAGTACGCTGAAAGCAGGCCCCCAAACCAGAAGG
AAAGCGAACAGAAACTTGCACAGGTCGCACGGGCCTTAGTTGGAAATATC
TCTGAGCAGAGAATGTTGGGTATTGGTCCCAAACCAATGACATAGGAGCA
GAAGCAAACTGTTAATGCGAAGTGGAAGACGATGGCACGGTCAAACGGTC
CCATATTGAACAGGATGGACATAGACATAACGCTCAATGATAATATAAGG
ATAGGAGTAGTGGCCAGCACAAGAACCCTACAAA-AAAAGGTTGAGTTGT
ATTAAAAAGTAGTTTCTATCAGGAAGACAGGAACAGGAACAAACATGT-A
AAAGAATTAACTAAAATGAATATTTACTTCCAAATCATGATCACTACATG
ACAAACTTGTTGCTGGATAAGCCGGCAAAGCGAAATGTTCGTAGATAATG
TTGGCAAGGG-----TTTTAGGATACCCAATGCAAATAAACCTAAGAAGC
AGAGTGTGGAATCACAACTATACAATGTCAGAGTATTGGAGTTCAGAAAT
GGTACA---TCTAATGCTGCTGGTGAGGCAGCAAAAGGCTATATAATGAG
ACCAGATGGTGTATCTATGAACAGACCTCTTTCTCTTGGTCATGAGGATG
CATTTCTACTAATTGTAAATCAACATTATTGTGAAACTGTAATGTTGATG
GTGTCTCAAAGTTTACCTTCTTCCGCAGACATCCATCAGCAGCATTGCGG
CAGTTATACAAGGGAG
View all "LDregion6B" genotypes
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