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Allele data for germplasm "PI221655" from the experiment "Hamblin et al. (2005) Equilibrium Processes Cannot Explain High Levels of Short- and Medium-Range Linkage Disequilibrium in the Domesticated Grass Sorghum bicolor. Genetics 171: 1247-1256.".

E.g., Germplasm L-WA58, Marker/locus pSB0080.

Items 1 to 22 of 22.

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Germplasm
Accession Name

Germplasm
Accession
Number

Subsp.
& subtaxa

Country of
Origin

Stock
Number

Locus
name
Genotype
View All Genotypes on
Marker
PI221655   bicolor, NULL Nigeria   LDregion1D TCTTCACTTTTAGCTACTTCCATACATGTCCCTAGCTTTGTAGCCTTCTC
CTTCCGTCCCACAATAAGTGCAATT--AGTTTTCAAACT--GTCTCAAAA
TAAGTGTTTCTAGCTTGTGCACCACCTAGCACTAGAGGGCTTAGTTGCCC
TCTGTTTCCAAAGAATAATCATTGCATGTTGGGACACTTTTTATAGGGGC
ATATATGTCATGTCCTAATAACACTGATCTACCCAAATAATCGTAGAACT
GCACTTACTGTCGGACAGAGTATAATTTCCTCCCTGAATCGTACAACTGC
ACTGTCCTATCCTGTCAAGTAGAAGTTGTTAATTTCCTCCATGAATCATC
AGATCTCATACCTTGTATGAGTATTGTTTAGTGCTACATCCTGTACTTTA
TCTCTCCCTCCCTCTCTCCCCCCAAAAAAGAAACAGGGGTGGGGAGATAC
CTTATGTTTCAGTTGTAGTAACTACCTGCGGTCATGTTTCAAAAAAAAAA
AAA----------GGAAAAGAAAAAACAAACCTACTTGCGGTCATGTACA
GGCAATGATATGGATGCTGACCTGTAACCTCATTAGTTTGAGTGCTATTT
GTATGATTGTATCCTTCGTTTCCTGTTTAATTTA---GTGAACTGTGCAT
CCTCGATCACTGTCCAATCTTACGGATACCTCACATTTTGTAAACATGCA
TTGGGTTATACTACCTTATCTAACTCT-AAGCGGCGCATGCTGTAATGTA
GGAGATAATCGAGGACGACGCAAAGCTTCGAGCACTCAAAGAAGAACATG
GAGAAGAAATCTATGCACTGGTGACAAAGGCGCTG
View all "LDregion1D" genotypes
PI221655   bicolor, NULL Nigeria   LDregion1F CCCTGGCGGAGAAGGCGGCGCTGGCGTACGCGGCGGAGCACGGCATGGAG
CTCGTCACCATCATCACGACGCTCGTGGTCGGGCCTTTCCTCAGCACGGG
CATGCCGCCGAGCATGATCACCGCGCTGGCGCTCGTCACGGGGAACGAGG
CGCACTACTCGATCCTGAAGCAGGTGCAGTTCGTCCACCTCGACGACCTC
TGCGACGCCCACATCTTTCTCTTCGAGCACCCGGCCGCCGCCGGACGCTA
CGTCTGCTCCTCGTGCGACACCACCATACACGACCTCGCCGCCATGCTCA
GGGATAGGTACCCCGAGTACGACATCCCGGAGAGGTTCCCAGCTGGGA--
----TCGAGGACGACCTCCAAATGGTGCACATGTCGGCCAAGAAGCTCCA
AGACCTTGGGTTCACTTTCAGGTACACGAGGATGGAGGACATGTACGACG
ACGCCATCCGGACGTGCCGGGAGAAGGGCCTCATCCCCCTCGCCGCTGCC
GGAAGGGACGACGGCTCTGCCTCAGTGCGCGCACCCGGCGAGAGGGATGT
GACGGCCACTGCCGGAGGGGACGTCGTCTCTGCCCCAGTGCGCGCACCCG
GCGGCGAGACGGATGTGACGATTGGCGCTTAGGCAACAATCGCTGGTTCG
ACAAAAATTTACGGCT-CCCCGTGGATGATGATGCTATATATCAGCTATC
TATCGTACGTCCCTTCGAGCGCCGCTGGCAATGCGGGAGGGAATTTACAA
CAACAATGCCTCGACGCGCGAAGTAAATT-----CGGTGTGTTTGAATTC
C
View all "LDregion1F" genotypes
PI221655   bicolor, NULL Nigeria   LDregion2A CCATCCGCCATGGATAGGCCGGCTTCATGGGTCATGCCTGCGTGACCGCT
CTGTGTTGT---GTAACGTGTAGTATTGCTGGGCCAGAAACATCACGCCT
CGTTTGTCATGCCCCGGCAATAGTTGTAGTGGACTGTAGTCTGTAGTAAT
TCCGTTGCGACTTGATGACAGAATCCGAGCAAAATACGTTTGAAGGCCCC
CTGTCAGAAAGGAAAATCTGCACTTAAGGCGAGTTTT-ACTACTAGTGTG
CTCGTGCGTTGGTCTGTGCCCTT-GTACATACACGTTCCAACGCTGCACG
GAATTCATGTTTACTGTCATTAGTCTTTAAGATGGAAAATTTTTGTGGCT
TGTGGTATTGATGCTTGGTTGTTTTttttTTTttGCTCCAGAATGTTTGG
AAATTGTTTCGGCGCACTGAATAGGTGATCACTTTGATTAGTTCNAGATA
TCTGAACAGTATTTTGATACGGTGTATGTTTCACCTTCCAAACATTTTTA
TCAGAAAAA----TAATAATAA---AAGATAGACCG--------------
--------------------------TATCATTTCCTTTGTCATATTTCT
TTAGTTCAATTTTGTTGTAGGATGTTGAGCTTATTTTACACTGAAAAAAT
TATACACTAATGGTTAAGGAGATTGTCATGACACTG--AATTGTCTGGCA
GATGCCATTTCACCTTTCAAACATTTTTTATTAGGGAAAAAAA-GATAGA
CAAGCGTATCATTTCCTTTGTCATATnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnn
View all "LDregion2A" genotypes
PI221655   bicolor, NULL Nigeria   LDregion2B GCGTGTGACATTGTTTTGCACGAAGGCTTTAAGGGCTTGT----TGCTAG
TTTTAGCGGGTTAGTGATTACTATCCTGATTCTAATTGGAAATGAAGTGT
CTTCCCTTTTCGTACATAATGTTATGATTTGTTATTCAGGCATCAATTGA
AATTTCTTTAGTTTCTTTTGTGCTGGGCATCTTTTATTATCGAGAAATTA
TTCTTACCTTTT-GAATTCTTATTGCTAGAATAGGCTTATATTTGTTGGT
GGAGATTATGCTGAAATGTGCATGATTCTGGATGATGAAGAAAATCAATC
GGATTCCCATTGATTTTACAATATGATTTTAACAACCAGCTACTTCTGAC
AAAATCATGCTATATCAGGATATACTTTGCCTCTTTGGTCCAGCAATCTA
ATCCTTTTGCTGATGTTTTTGTCATCGTGGTTGATTATTTGATACATGCA
TTTGTTATGATGATACACCATTTTCAGATCATTATGTATGGTTCTGTATC
ATCTTAACTCCTTTAAATTGATTCATTCATTTATTTATATTGTGATGTGC
CTATGATGTGATCAAAATATTTGCTACTCTTGATGGGTGTT---CCCATT
TGATGATCTTAACCACCAAGATCTCTGAGGCCCATCACATTGCAATTAGA
AAGACTCAGTTCATATGAGCACTTAAGAGTGGCAGTAGGAGTTGC-TGAT
GTAGTGTGTT
View all "LDregion2B" genotypes
PI221655   bicolor, NULL Nigeria   LDregion2C AGTGCATAAGAAAAGGTAAGTATAACTATAAAAATTTGCATTTTATCAGC
AAGTGACAATTATATCCAGCTTATGGCCCATCTACAAGACAAACTAGCTA
AATAGCAAATCATCTGATCAAGAATACAAGTCCTGCATTACATTCCTCAT
ACAATGAATGAAGGAAAAAATGCTACCCAAACACAGAGAAAAGACATCCC
ATGG---CTTCATCTTTAAGGAGGGGAGTATCAAACTGTAGCTGTTCAGG
AAACTCACTCAAAATAGTTCAGGGAGGAACAGGGGTGGAGCCAGAATATC
AAGTCACTAAGTCAAATACACTTTTTGGTTAACTAAGAAGGGTGGTTTGC
AAACCTTAAGGAACTTCTAATGGAATTTGAATTTTTCATCAGGTCAGCTG
AACCCAACGAATACACATAGCTCAGTTCCTGTGGAGGGACACACAAGGAA
CACTTGTCCATGGACACTTGTA------AAGTTTCATGATTTCTAAAACA
CAATCACGTGCAAGAGAATGATCTAACATTTTTATGATTAAGAATTAAAT
ATCACTACATCAGTACATTAATCATAATTGGAATTTGTTACTATTTGGTC
GAGAGAGTTGGACAGAGCAAAAGAGAAGGAAAAATAGTTTATAATACCTC
GGCCTCAATTTGCTGAAGTAAGCCAATCTCTGCTTGCTATTCCTAGTAAG
ACGGTGGTCTGA
View all "LDregion2C" genotypes
PI221655   bicolor, NULL Nigeria   LDregion2D CTGCTGCCTGCTGGCAGGGGAAAAAACTTGAGACGGTGGTGTGGTCGCTG
ATCGGCCGAGGACACAGGACAGCCAAGCCGAGGGCCAGGGGGAGGGGGGG
CACACGCTGTCGATCAGG--------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------------------------------------------
--------------TGTTGGCAAGCGTGTACCACGAGGTCGGGTCCCAAC
TCCCAACTACCCAGCTCACCCACCGGCCCGCCCGACCCACCTGTCAATGC
CCGCGCACGACTTGCACCCAACCCAGCCAGAGCCAGCCGCATCGCAGCTA
GCTTCGACTTCGAGGGCGAGCGAGCGGCTACCAACTGGTGACGCCGGCGC
GACGTCGTA-TCCACCACGTATGGCCGTAGCCCGCCAACTGCGTCTGCGT
GCACTGCTGACTGCTCCCTCCGTCCACAGTCGCG-TTTTTTACTTGCAGA
CATTATATTTAACTGTTTGTTTTTTTATAAATTATAAAATAAATAAATTA
TTAGTAAAATATCTTTAATAATAAAATAAGTCTTAATAAAATATATAATA
TTTATGTAAAAAATCAAATAAGATGAATAAAATGTCTAAAGTTCTAAAAC
GATACTATTTTTTGAACCGAGGAGGTAGCTTGGCCAAGCTGTGCAGGACA
ACGCCAGACCTCTTGCCCTGTGCTGACTACTAATTTGTACTGAGCACGGC
GAAGATCTGTACTAGATGCTGAATAATCCGCTGAAAGCTACTCTAAAGTC
CTTCCCCGTACCAGCAAGCAAACGGGACTTTTACTGGACGCCGCTGTCAC
A
View all "LDregion2D" genotypes
PI221655   bicolor, NULL Nigeria   LDregion2E TGTACAGCAGGACCATATCAAATCTAAAAATAGATTAATGATCCACTATA
TTAATAACAATACCAAGATGTGCACATGAAA-----------CTAACCGG
ACCAATGTGAAGTTCAATTTTACATCAACACCCAGCTACCACGGATTTTA
TTTTTCCTTAACCCAGCAGACCTTGCTACCTGCTCATCATTACCAGCTAT
CACATGACCACCAGGAACTTGCTCTTTCCTTTTTGAAACCCACCAAAGCT
TTGCCACTGGCTCAACATTGAGATTCCCTGACCAGTGACCAGCTCCTAGC
CTACCCATCCTAACCATAGGATTCAATCACGATGTGGTCTTCAGCTATTC
CATTATCAAGTTGAAACATCAGAACACTACTCAGGAAGACAGGTACAAAC
AACTCATGTTCATCAAAAGTTCACTTAATTTCCAGTCTTTTACCTACTTA
TTCTACTCAGCAATCGAACACTAGCAAAACATACAAACATTACTAATTAT
CATTCAAACCTGAAAATACAATCAAAAGTTTCATGATCTGGTATAGATTT
CTCACAGCTCA-TTTTTACCAACAAGTTCATCTCTCGTTAGCTCCACTTG
CCCCTACTTTTCAAGAAGGAATTCCCCCTGCCTTTCACTAGTCAATAACT
TTTTT-AAACTACACGCACAGCATAGTAC-TTTTTTTCATGGAAAGCATT
CCCTTAATAAACATCAAATGACCAAATCAAC-AACCTAATCAAAGCACGG
AGAGTTTCATAACC
View all "LDregion2E" genotypes
PI221655   bicolor, NULL Nigeria   LDregion2F GTAGTATTACTAAAGCATGCAGCAGAACCACTTTCATCTAACTCGATCTT
CATACCAAACTCAACCAAATTGTCGCTGCATTTTAACACATTTGATTAGA
TCGCAACACAGAAATAATAAATTGGGCAGTGAACTTAAGAACAAATAAAT
ATTTGATTCGATACACAAAATGTGGACAATTTGCTAGTTTTAGTGTTAAT
AGCAGAGTAAGCTACTAGCCTACTATGACCCATCTGACTGAAAATAGTGA
ATGCCATTACCAAAGAAGTGTTTGGCAGTTACATTTTTGTTACAAACCAA
AAATACATCTAAAGAAATAGTTAAGCCCACA-TTATAAGTGTTGCAGACA
CCATCATGCTGTTACTGTGAAGAACAACT------ATTAGTAAAGTTGCA
GGCTCCTAATTTCAACATAAAAATGAAATGAAGAATCATCAATGATATGA
TGACACTGCAGCACCTCAATTTACCTTTGCTCAAACATTCCACATGTTTG
CGAAAAGGAATCAGTTGATACACCAAATGAATTTAGAAGTGAATCAATTT
CCATTTGCTCTTCACATTCATACAAGATGGGTGACTTTTTTGAGCCATTA
TCCACAATTCCATCTGGAGTATGTATGAATGAACTTGACAGTTGATGTGA
TATATCGTTCTGTCTGTCTCCAGTGCTTGGCATAAAGCCAGAAGATTCTA
TGTGACCAGGATTTGTTCCCC
View all "LDregion2F" genotypes
PI221655   bicolor, NULL Nigeria   LDregion3A nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCCG
CCGCGTCGACCCGTTTCCGGTTCACGTTGCAGGGCTCGGTCGCCCTGCCG
AAGCTGCTGCCGGGCCGCTTCAGGTGCGGCATCGCCTCCTTCTCGCTCAG
CAAGGTGCGCAGCTTCTTCTGCTCCTGCGCCATGGAAATCACCACTTTCA
GGTTAATTATTCAGAATTCTTGTGAGTGCTGTTCTTTTCTTGCATTTTCT
CGCAGGTGTCAAACGATACAGTTGCAGTAATGTCTGTTTACCCTGAGTCG
CCTCCTCTCCTCTTCCTGCCTGATCCTGGCTTGCTTGTGCTCCTCCAAGA
CTGCAACCAGGCGAGCCTTGAAAACGGCAAGAAACAGATCAAATTCGTCA
GTTTCTACGACCACGACCACTGAATCATGCCGCCACAGCAGGAACTGGAA
AAGTAGCATACCCCGTCGTACAGGAACGGCTTCTTTCTTTCGCTCTCCCA
TGCGAGTGTTCGAATGATCAGGTTGTCAACAACGGCTGCAGATTTACCAA
CAACGAATTGCTTTAACCGAACTTCAGAGATGCAATCGGAATAACCAAGT
AGGTATCACATTTGGTCTTGTATGAAATGTACCTGGAATCTTGGnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
View all "LDregion3A" genotypes
PI221655   bicolor, NULL Nigeria   LDregion3BC TGGGCCGTTCCTGTGCGACGCCGTGAACTGATACCTCGGTGCGATGAGGG
CGAAAATCGGTGCCATGACCTGCAGTTGGCAGCAGAAACGTTTTTCTTGA
AGATGAGTGATGGTGTCTGCAGACTGCACACACTACCGTAAGCACAAAAT
TGGTAGC-AAGCGTGAAGTAATATTTTCTCAGAACAATCAACCCATAAAA
A-TGTGGAACAATATGTTATAGATCCGAAAGTTTACTGACCCCGTGACAC
AATGTTTAGGAAACCACAAGGGACCGTGCTTCTGCTTCATTTTTTC---A
AGGGTATAAATATACTGCTAGATTATATTGTTTAAGAAATAACAAGACAA
ATATTACTGAACATTCAACCTGCTCCATTTTT-CAAGCATATAAGTAGTA
GATATTGTTTAAGAAAGAACAAGACATACCGCTATGACTGGGTGGGCAGG
CTGAACACGGACAGCTGGTGATGTCAGGACAATACCGCTAATGAGAGTTT
TTACCTCTGGATCAAGTGCAGCCTATTGTGAATCAAAACAGTTAGATTTA
AACAGCACAAAAGAAATGTGCAACAACAGTCCTGAA-GAAGTAAGCTCCA
CAATAATGCAATTCATATGGCACCGCTGCCATTACCTTCAGAATGATACC
TCCACCAGTCGAATGGCCGAAGCAGAAGCATGGAAGACCAGGGTTCTCGG
CTAATACTTTCTTGAGGTACATTTTCTACATTAATCAGAAGATTTTGAAT
AAGGATTTACACAGATGGGTCTCAGACAGCTGTGAAGATATTCAATTGCT
CTTACCAAATCATTGACAGCATGATCAAGAGATnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGATGCCTGCAGTTCTGA
CAAATTCCAAATATTCGTTAGCTCAATTGTTTGCTGCATTATTACTATTG
CTATCTGGTTCCTTATTATAATCTAGAATCTCATTCTATGCTCCTACAGC
TTGACATAGTTAATATTTTACATGGTTATACGCAGTAAAAAAAACTATAA
GCAACTCCAAACTAGCACGCAGTTTGTCTAATTCAACAAAGAGAAGCTAA
CCTGAATAAGGGAAAATTAGTTCATAGGCCATTTTTTTGTAATTGTTAAA
TGATGATGTGTACCCAACAATCTGTATCCCTCAAACAGAGTTAAGTGTCC
AAGCCGACAATTATGAATAATCAACACTTCAATTACAATATGGAATGGGA
ATCCACTGAACTGGTGCACTTTATCTAAGCTCCCAGATCACAACCAGATA
ATACACGATACAATAAGGCAACCACAAAGTAACCATGAACGTGGAGAAGC
ATCATAGCTAAGCTCCCAGCTACAAACCAGATAACATTATCCATCTCAAC
TTCTCAAGGTCAGGGCCTACTTTGGCAGGCCACATGGCTCAGAATCCACC
AAATACAATGGTAGGGAAAGCAGAAGTGCAACCTATAGGTCAGGAGTTCA
AATCCCTGTTCTCACCACAAAAATAAATAAAAAAAAGGCCAATCGTTGCT
ATTTTCAGTGACTGGGTCGGTAACATTAGAATCGGATTTAGACGGAGTAA
GGACAACCAAGGAATGAACAGCTAAAATGAAGCCCTATTTTGGAATGGAG
CAATAAAATTAGAATGGGACTAAGACGGAGTCGGACAACCCAAGGAATGA
ACAGCCAAAATGAAGACAACAAAACACCTGGACACTAAAGTGTAAAAAAT
AGACGGCCTTGCATTTCACTTTAGAAATTGGGTCCATTTCGTCCTAGTGA
GAAATTGGCATCTTTATTCATTGCTCTCGTCATAGCTGGTGAATTGTTTG
TGGCACTAGTTAATTAAGTTCACAATCACACAATCATCAACATGGATGAA
AATCAAATCAAAACATACATGCATAAGTAGTTCGTGATACTATATAAGAT
TTGAAGCATGACAACCAAAAnnnnnnnnnnnnn
View all "LDregion3BC" genotypes
PI221655   bicolor, NULL Nigeria   LDregion3E GACCTTCATGACCATGTTGTTGGGGTGTGCTTTGTAGCCCAGGATATGAC
TGTTCATAAGTTGGTCATGGACAAATTTACTCGGGTTGAGGGGGACTACA
AGGCAATCATTCACAACCCAAACCCGCTCATTCCTCCTATATTTGGTGCT
GACCAATTTGGATGGTGCTCTGAGTGGAATGTAGCCATGACCAAGCTTAC
TGGGTGGCACAGAGATGAAGTGATAGATAAGATGCTCCTTGGTGAGGTTT
TTGACAGTAGCAATGCTTCCTGCCTTTTGAAGAGCAAAGATGATTTTGTA
CGTCTTTGCATTATCATCAACAGTGCATTAGCCGGTGAAGAGGCAGAAAA
GGCTCCATTCGGTTTGTTTGACCGCAATGGGAAATATATTGAATGCCTTC
TGTCAGTGAACAGAAAAGTAAATGCAGATGGTGTTGTCACTGGAGTGTTC
TGTTTCATTCATGTTCCTAGTGATGACCTGCAGCATGCGCTACATGTGCA
GCAAGCCTCTGAGCAGACAGCACAAAGAAGGTTGAAGGCTTTCTCGTACA
TGCGACATGCCATCAACAAACCTnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnAATGAAGAGCAGATGAGGCAGGTCCATGT
TGCAGATAGTTGTCATCGCCAGCTAAACAAGATACTTGCCGACTTAGATC
AAGATAACATTACTGACAAGTAATCTTCTAGTCTTTTAAACTGTTCTATT
AGGTTATTGTGTTTACTTTCATCTACCTCGTTATTTGACAACTTTCTGAA
CTGTAGGTTAATGGTATCACTTAATTTTATTTCACTAACTACTACTGAAG
CTTATAGCCATATTCGTTACTACCAACTTAATATTTATGTACCATTATGT
TCACAGGTCAAGTTGCTTGGATTTGGATATGGCTGAATTTGTGTTGGAAG
ATGTGGTGGTGTCTGCTGTAAGTCAAGTACTGATAGGTTGCCAGGGTAAA
GGTATCAGAGTTGCTTGCAACCTGCCAGAGAGATTCATGAAGCAAAAAGT
TTACGGGGATGGTATCCGACTCCAACAGATCCTCTCCGACTTCTTATTTG
TTTCGGTGAAGTTCTCTCCTGTTGGTGGCTCTGTTGATATATCTTCCAAA
CTGACTAAGAACAGCATTGGGGAAAACCTTCATCTCATAGACTTCGAACT
TAGGTACACTTGCCATGCTAATTTGCATGCATACACTCATTTCTGAATAG
GAAATCATAAGGTATGAAGGCTTAAATTACTCTTGTGTTTATGGATTTAT
GGTTTTCAGGATCAAGCACCAAGGAGCAGGAGTCCCAGCAGAAATATTGT
CACAAATGTATGAGGAGGACAATAAAGAGCAGTCAGAGGAGGGTTTGAGC
CTTCTTGTTTCTAGAAACCTTCTGAGGCTCATGAATGGTAAC
View all "LDregion3E" genotypes
PI221655   bicolor, NULL Nigeria   LDregion4A CGGCGGGCCGGAGAAGCA---------AGGAGG---CATGGGGATGGGCA
GCGACGCTGCCGCCGTGTTGTTCCCCTTCTCT------------ACCACC
ACCACCACGTCGCCGCGGCTCTGCGGCACCGCCGTCAGTAGTCACAGGAG
GTCAGCAAGGATCCCCATTCCATCTCCAACTCCCGTCCGCTCTCCTTTGC
ATTGCA-----TTGCATAATGGCAACACGGAACAGGAACAGCTTGCGATT
TCTTACCTCTTTAGATTTGATCCCTCCCTTCACCGTTTGCTTCCCCGGCT
CGACTTCTCAACTCCGTCCATCTATCGTTTTGCAAGGACAAGCATCCCAC
GGCCACTCTGAAAAAGGGGG--GAAAAAATTGCTTTTGCTCCTCTGAAGG
TCCCGTCCAGCAGATGCCACTTCTGCTTCTCTTCATAATACCATCAGTCG
CCACCACTCCTGGATCTCTACAACATCCTTTCTTAGTTCATACAGTGCTT
TGTTATCATTTCCTAGAGAGTGAAATTTCATTACCTGTTCCGTGGTACAA
GCAGGTACTAGCAGCCATTCCCTGGAACAGTCTGTTTCAGACTTTCAGTC
AGTTGATTCTTCAGCATCCGCTGTTCTTGGGAGGGAGAGTGTGGCAAAGG
CAAAATGGTGTCATTACAAGCAATGCACTAGACGTTTACTACACATTGCC
AACTCAAGTGCTAACTAATCTTGGCGTCTAATAAAACTTTTGGGGG-ACA
TTGCATTGACCTGC
View all "LDregion4A" genotypes
PI221655   bicolor, NULL Nigeria   LDregion4C CAAATGGGTATGACACATGGACACAGTTTTCAGTTTCTTGTAAAGTTGAG
GTGTGAATAATATATTAGTTTTTTCTATTAAAAAATATTATCTTGTTATA
AAAAACATTGAAATTCCTAAGTCTGAAAAGGAACTGCACTTATGTTTCCT
TGTGAACTGTTAAGATATATTGTGCTGTACTCCATCTAGTTCAGTGTGAA
GATCAATTATAAAAGCATGGCTTCATATTACAACCAACATTGTTATGGCC
CTGTCCTAAGATTCTTGATTTAAGTATTAATTTTAGGTCTTGAGCTTCGT
TCAGAACTGCCTTGAAATATTCCATATAAACTTGTTACTGAAACAAATTG
AATCTATGTGGCTGCAAACACCAGAAATGGCAAGATAAATTGCTAAACTC
CGGAACACATTCAGGATGTACACATAGTGCAAGAGAAATTGCTTTGAGTA
CCTCATCTACCTTGCAAATTCAATTTCATCTCACTGGCTCCATTGGAGCT
TGTTAATCTCATCGTCTCTACTCATAATTCTCTGTGTCAGATTTTCTGTA
CATCTGGCCTAATAAGGTTCAATACCTTTCTCCACATTAGTACTAACATG
ATAGGATTTACTTAGCAAGCCAATATAAAATGTTAAATCACATCTTTCAT
CCTGATTTTTGTACTTTTCTGAATTTGCTGTTTTCTTATATCATATTTAA
GTA
View all "LDregion4C" genotypes
PI221655   bicolor, NULL Nigeria   LDregion4E TAAAGAAAGTACATTAGTTCAAAAGCAACCAAAGGAGGGTGAACTTCAGA
ACTTGGCATATAATGATCAAGAATTGCTGCATTGGCTAAACAAGTTTTCA
AGAGAGTAAAGGTAGAGGAGAAT-AGTCA---TCCATGACGTACTAAATG
CTTCACTAGTCAAAATACAGTGTGTTGTACTGGAACTTTTTTCGAATCAC
AAGGAAGGAACCTCAATTAAGGGACCTGGGGACCAATCTGGGTCCTCAAA
AATATCAATAAACACTGCAGGATAGTTTTTTTTTATCTTAACACTGCAGG
ATAGTTACTTCC-AAACTTAACTCTCTTGTCATTAATTTGAGAAATGGTA
AACACAGGTTATCGCATCATCTGCCAGCTTACTGCAAATTATAATCAGTA
TATGTTGATTTGCAACCATTACCTACTGAATCTGAGAAACAATTTGATGT
GCCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
View all "LDregion4E" genotypes
PI221655   bicolor, NULL Nigeria   LDregion5A CGCATGGGAGGTCTCCAGGGCAGGGATGATGCCCTCCAGACGAGAGACAC
GCTTGAAAGCTGAATGTGAGAGTAGCCATGTGATTAGATGTTCAACATAG
CATTGATGACATAAACAGAGTGAATACCCTACTGAATAAGCTGTTGAGAC
AGTTTCTCAATTATTCAGGAAAAAAAATCCTACAGGCCTTACGGATGCTG
AACAGTCAACAATGTATCTAGTGTCACATCTGAGTATAAGAGTGTTCAAG
ACTTGAACATTGTGTTTGGTTATTAAAAAAAATCACATGTCAGCATCAGC
TAAGGAATAAGACTTGTCTTAAATATTTGTCTTATCTACTGAGGAAAACC
TTGGAGGCTAGGATTATGTTATTGGCATTGCAAATATCCAGAACAGCTAC
ATCGACTGAATATATAACATTTCGTCAATTAAAGATAGCATCCTGCTGAT
TCAACACGTTTGACATATTTTTCACATGTTTAAAACAATTTCAGGCACAA
ATGACCAAACAGTGCAGTTGTGCAGTTCTACTGATATAGCATACAGTGGG
ATTTGGACACACATTCATAATTCATTGCTGCCCCTATCACATCAAGAAAT
ATCAGAATGCCCATGTGTTATTTAGAAAAGTTAGTAATTTGATAGTGATC
TCATCATGTTTGAAAGCTGACACCAATGCAAGCATCATTTTGTAGGTGCA
TTGGAAATCAACTTGTCAAAAATTAGTTCAACCAATACAGAAGA
View all "LDregion5A" genotypes
PI221655   bicolor, NULL Nigeria   LDregion5B AGATGCATTCAGGTATGCATGCAGTGTGTTGGCAGTTTGAATAGTGGCTC
AGATCCTTTAATCATCTCATACTTTCAAAAGATCATATTTTCTGTTTACA
CTTTATGCTGAGGACTATGTATGTCAACAACATAATAAAAATGCCTTAAA
GATAGTACTGGTTACAGCACATAAAAA-AATACAGAACTGATAGGATTTC
TTTTAGCATTGAGACAACTGCAAGAACTTAAGGGAATCAAATTCTAAATA
AAAGAACCATATGTGCTGAAAGTGTTCAGTTAAACGGTTCTCCATCCG--
--AAATTATAGGCCGTTTTGGTTTTTCCAGATAC---------ATAAGAA
AAATGTATATCTAAAAAAAGCCAAAACAGACTATAATTTGGAACAGAGGG
AGCATATGCTAAACATTCAGTCACTCGTTCTTAGCCAAAAAGTAGGCTAC
AGGTCCTAAACGTCCATTTAGTCAGCCCAAAAAGACCTTTTAGCGTTTAT
ATGATGTTTAATCAGCCTAAACACAATTGAACATAAATAAACATCTTCAA
GGTGTACTTTTCGGAAATTTCCAAACTGTAGATTATGATTTAAGACTAGA
TGCCTTATGAGTTANNNNNNNNNNNNNNNNNNNNNNNNNTCAGTGAGAGA
CTGAGAATCCAAAAAATATTTGGACCAAA
View all "LDregion5B" genotypes
PI221655   bicolor, NULL Nigeria   LDregion5C TAAGAGGAATGATTCAAATTCCGCAATTATAACGCGCCCATCGGTTTCAT
GCTTAGAAGCTGAAAAGTGCAAGGAAGTGGAATC---------------C
TACATGTGAAATTTAGTTATGAAAAACAAACAACCATTCAATATGCCTAT
TTGTTAAGGAGCTTGCTGGTCTGGAACTTTTCATTCCTTAATTTTAGTTT
TTATACAGAAAAACGTGCATAGATATATCAAGAGAAGATGAACAGGTACA
CAGATGCATGCCTTAAGTTTTGTTTTCCAACATATTCTTGCAATGATTAT
CCTAGTTCTAACACAATCTATGAAAGTGGCCATATTCTTTTAGGACTTTA
TAACTGGCATAATACACCCACATGCTCCTCTAGTCATGACATGAAAACAT
GAGTACTGGCTGTCACGATCTGTAAAATGCTTTGCTCTGTTCTGATTTTC
AACTCAAAAATTTCTAAATTAAAAAATTCAATAGTTTGGACAACTTTGTC
ATAGAATATGACGACCAAATTATAAGCAGTTACTAAACCAGGTCTTGAAA
TACAATCATAAAACTATAATTTGAAAAACAGAATGGCTGCAGCATTAGAA
TAGAAGATAGAAAATTGTGTATAGAGCTAGGATAGCATGGAATCATATCC
AAACATACATGTTCTATCCAAGTTGAAAGACACC
View all "LDregion5C" genotypes
PI221655   bicolor, NULL Nigeria   LDregion5D CTCTTCTCGGCCTCCCCCACCTGCTCGACCGAATGCCCAGCTGGGGATTC
CAAAATGTCTCTGCGTGTGTGGTTACGGCGAAGGTTTCGGATCGTCTCGT
AGTTTTCCTTTGTCTTAAGTCTGATGCTGCTGCGAACATGTGAAGGACTA
ACTGTTTAATTTGCTTGGTTGCCTGCATTCTGTGAAGTAAAGTCCACAAA
TGACAATACTGAATGTCTGCCACTGAAACTGTGTTGCCACTTACAAAGCC
TTCATCTCTTGCTTATCCATTGCATAAGATTTTTAGTCCAGTAGTTGTAC
AGACGGTAGAGTGCTGCGTATGGCAGTCATGTTTACCAGAAAAGATGAAT
CTGTTGTTTGTGTTAACCATAGTTGAAACGTGTTGGAAAATATGGAGTAG
ACTATTCCGTTGCCTAACAAACTTTAGTTCAAAATGTGCTCGCTGTGA-T
TGCTTTCAACTTTTTTTTT-CCTTGGAGATAAATAATTATGGCCTTCTAT
GCAGTTTGATGCACTTGTTGCGGCATTGCCACTATCATCAGAAGAGGATC
AAGTGAAAAGAATCCAAGAGCTACAGGTAGATATCTGACAGTCAGATTAA
TTTATCGAGCACTGATTTTTCAAGGATGGGCATCTGTCAAGCTCCTCCAT
TAAATTGTATATGAACTTAAAATTTG
View all "LDregion5D" genotypes
PI221655   bicolor, NULL Nigeria   LDregion5E CGAGACGCCGCGCGACGACGAAAACAACCGGCCGGACGACGTGCGAACAG
ACGGCACGGCAGGAATCGTCGGAGTTGGATTGGATGATGATGATAAAGTA
TGTAGCTGGAGACCGTATATAGCTAGGGACGGATTGATTCTTTTCGAAAA
TGTTGTTAAAGATAAAGAGGATTATTGGGACGAAGGTGCAATGAAACTTC
TTTGAGCCTTTCTTCGCCGCAGCTTGCTCGACGACAGGACCTAGTACTTG
TGTGTGGGGGAAGAAGAGGAAAAGCTCTTTATTCCATGCTCATCTTTACT
GTCTCTGAGAAGATAAAAGAGAACCCACGACGCTCACGCAACCACGTACG
CACTGCAGCCCTGCAGGTTCGCTACGGCTACGGCCTCCCGTGGTTTTTTG
CCGGGATCGATGATCCAACACAACACCACGCTCGCTCTGGATCGATGTCA
GGCGCCCCGTGCTCCACATTAACCTCCAGTTCTCGTAGAACAGTGGTTCT
TTTTCTTATATGGCGTATAGTCAGGCGTCCATTAATCATTAATAGTTACT
TCCTCCATTCCAAATTACAAGAAATTTGACTTTTTTTTTACCCTCAAGTT
TAATCAAACGTCTTATAATTTAGGATGAATTGAGTAGCTAACTAATAAAT
C--ATAGCTAATATTATTAGCTATTATATAGTTTGGTCCAACTAAACCTA
TTTGCATCGAAGAAGCTAATTATATTA--TTATTAGCATCTAACTAGTAT
TACCTTTATATAGATCCAAACACAAAAAACTTCATTTTCAAG
View all "LDregion5E" genotypes
PI221655   bicolor, NULL Nigeria   LDregion6B CATCATCACAGGCAAGCAGTACGCTGAAAGCAGGCCCCCAAACCAGAAGG
AAAGCGAACAGAAACTTGCACAGGTCGCACGGGCCTTAGTTGGAAATATC
TCTGAGCAGAGAATGTTGGGTATTGGTCCCAAACCAATGACATAGGAGCA
GAAGCAAACTGTTAATGCGAAGTGGAAGACGATGGCACGGTCAAACGGTC
CCATATTGAACAGGATGGACATAGACATAACGCTCAATGATAATATAAGG
ATAGGAGTAGTGGCCAGCACAAGAACCCTACAAA-AAAAGGTTGAGTTGT
ATTAAAAAGTAGTTTCTATCAGGAAGACAGGAACAGGAACAAACATGT-A
AAAGAATTAACTAAAATGAATATTTACTTCCAAATCATGATCACTACATG
ACAAACTTGTTGCTGGATAAGCCGGCAAAGCGAAATGTTGGTAGATAATG
TTGGCAAGGGA-TTTTTTTAGGATACCCAATGCAAATAAACCTAAGAAGC
AGAGTGTGGAATCACAACTATACAATGTCAGAGTATTGGAGTTCAGAAAT
GGTACAACATCTAATGCTGCTGGTGAGGCAGCAAAAGGCTATATAATGAG
ACCAGATGGTGTATCTATGAACAGACCTCTTTCTCTTGGTCATGAGGATG
CATTTCTACTAATTGTAAATCAACATTATTGTGAAACTGTAATGTTGATG
GTGTCTCAAAGTTTACCTTCTTCCACAGACATCCATCAGCAGCATTGCGG
CAGTTATACAAGGGAG
View all "LDregion6B" genotypes
PI221655   bicolor, NULL Nigeria   LDregion6C CACCC-------AATCGCCTGAAAAATTGTGGCTGCCGTTTCAGATTGCT
CTCTGCATCTGATTTTTGGCTTTGCTTTACCTGCATGTCTCAAGTCTAGT
TACCATGGGAATACACATGTGTAACATGCTTTGCATATTTTCATTTTCAT
GGTCTTAGGCTCTTGTTTTGATGAATTAAATGCCTGCATTAATTCTTTCA
ATACTTTCTGCTAAGTT--AGTTATCTTGTGCTTAATTGTATATTAGCTG
TATTAAAAGCACTGTGATACATAAAATTTTT--TTTAGTCACTTGAAAAT
ATTAAGAGAAATTTAGTTATCGGGGAGAAGGGGAGGGGATTGGGTTGGGT
TTTGATTCTCCCTTTTTAATTGTAGATATTATGCTAAGTCTTTTTTAGGA
ACAAAAGTTCAATTTCAGCTGGCTGACTACAATCAGCGGTGTGCTAATCT
TCTTTTACTGGAATGAAAGCACACATGCAGTTCAGCCTAACCTATTT-AT
CTAGGTGGGCATAAGAGTTTCATTGCTATTCATGTTAGTTTTTAAAAGTG
TGATGAGTGCAATATGGTGAATTGAGATAGCATCGGGGAGCTGAGCCATG
TATGTTACTGTGGTTTGACTTGTGGTGTGCTGTAGACTAATTTATT-GAC
ATGTGCTTCCATACCCATCTCTAAATTATTATGCTGTACTATCAGTTCAA
ACACATATGAGAATTAAACGTTTGTGGTTAAAACTGATCCATCCATTCTG
TAGTTGTTGTCTACCGCCTTTTAGAATTTAGAGTGACACCTTTCGACTAG
CATATATATCAGGGAGTTGGGAGAATGCCATAGTTAGAACTTAGAAGCTA
TTAGATGCAAGGGACATTTTGAATGTGAGACATTTATTTTATTGGCTAAA
CTTTGAATGAATGAAAATAATTATGATTTTAAGTATGGTTGTTCTAGTGC
TGCCAAGGATTAGGATACCTTAATTTGGGATACTAGGTTTGCTTATCCTC
TATAAATTACATTGTTTATTAGCAATGTGGCCTTAACACTTTCCATTCTG
ATGTTGCAGTCATCCTTTGGTTTCATTGACTACTATGACCGCAGATATGC
TGCACTAGCAATTTTATCTCTCAATGGCAGACCACTGTAAGCTTTTTGGT
TTTGTATTCCCTCCATTTGTAATTGTAAGTCGTTTTGGCTTTTCTAGATT
CATAGGTGTATAGCAAAACTATGTACCTAGAAAAGCCAAAATAACTTGCA
ATTGGAATGGAAGGAGTATGTGCTAATTTCTATGATCACTGCCCTGTTTT
TTGGCACTAATTTTCTAATTATCACCAAAAATCCAGGTATGGTCAGCCAA
TAAAAG
View all "LDregion6C" genotypes
PI221655   bicolor, NULL Nigeria   LDregion6D ATGGTCTCATTACAGGGAAGATCTTTTGTCGGGTAAGCTCAGCTATTTGT
TTTGCATCTTTGTTAATTTAATTTAGGGGATTGATGCAATCTCTGGAGCC
AATATTTGCTTTATGGCTCCATAAGTTTGGACACAAGCAACTAGCAATTG
TTAAATTTGCAGAAAAGGGCAAAGTCACACCGTTACTCTGTGCTGCTGAG
TGCATGGTTATATTGATGTTAAGTTTTATAAAGTGTTTCAGTATCTTATG
AGCCCATTTTTCCATTTCAAAATCCTGGATATCTATCAATTTTGTCTTAT
AACAGTAATAATAATGT-GGGGCAATACGTTTTGTGGGCATATAATAGAG
GGTAAATGTTATCCCTCTAGGTTCAGCTTGGTCTCTAGAAATCAGGACAA
AACCAGGCATCATGG-CCCCCGATGCCAGGATGAAAACGGTA-TAATTTG
AACTTGAAGAAAACCGAAGAATTATTCATTTGGCTGATATTGATATGCCT
AGCTGCTGCTGTCTTAGGGATAACTATGTTTGCACTCTGGATATCAACAT
TGATTTTAAAATTTAATTTGCTTGATTTTGATACTGGAATGGAGATTTAC
GCACTTCAACTTGC--TATCTGTTGATTTTAAAGTCATGTCAACAATCAC
CTTAGAACATTGTTGCCGCATATGGGAGTATTGACAGTGATTGTTCGATC
TTAGGTTTGGCCACTGGAGGGCTTTGGTCCAATTGATTCAAACCAGTCTT
AACAGGGGTAATTTAGCTTCTTTGTTGCATCTTGTTTTCTAAAGGTAA
View all "LDregion6D" genotypes
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