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Experiment "Genetic structure and diversity in Oryza sativa L."

E.g., Germplasm "IRGC9542", RA4969, Basmati 1, Marker/locus RM22.
expand all sections collapse all sections  Experiment "Genetic structure and diversity in Oryza sativa L."
Title Genetic structure and diversity in Oryza sativa L.
Design 234 rice accessions from wide geographical regions of the world genotyped at 169 nuclear and 2 chloroplast loci to elucidate diversity within subspecies Oryza sativa indica and japonica
Polymorphism Type (1) SSR
Allele Scoring Protocol (1) PCR products were size separated by capillary elctrophoresis using ABI 3700 DNA analyzer; SSRs were analysed with GenScan 3.1.2 software and scored with Genotyper 2.5 software.
PI(s) McCouch-S-R, Tai-T-H
Comments Prediction of population structure was model-based (STRUCTURE) and based on data from 169 genomic SSRs. Reference: Garris et al., 2005.
toggle section  Germplasm (234)
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